Detailed information of matrix profile UN0458.1

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Profile summary

Name: Nkx2-3-5-6
Matrix ID: UN0458.1
Class: Homeo
Family: NK
Collection: UNVALIDATED
Taxon: Urochordates
Species: Ciona intestinalis
Data Type: SELEX
Validation:
Uniprot ID:  
Source: 31267468
Comment: No

Sequence logo

Frequency matrix

         
A [ 233 240 251 234 140 224 73 918 984 5 47 37 38 186 206 232 234 238 257 271 ]
C [ 184 197 196 202 273 110 281 4 3 3 8 4 197 267 254 261 249 237 234 228 ]
G [ 289 286 282 253 274 92 139 62 7 976 16 949 630 225 189 217 214 209 214 213 ]
T [ 294 278 270 311 313 574 507 16 5 15 929 10 135 321 351 291 303 316 294 287 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0458.1 UN0458 1 Nkx2-3-5-6 Ciona intestinalis
NK Homeo
UN0458.2 UN0458 2 Nkx2-3-5-6 Ciona intestinalis
NK Homeo
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: