Detailed information of matrix profile UN0442.2

  1. Home
  2. Matrix > UN0442.2
This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

Community curation

Your email will only be used by our team to contact you.

If your contribution is significant, we will acknowledge it in the manuscript of the JASPAR upcoming release. We do not share your information with any third parties.

Profile summary

Name: Atf4-5
Matrix ID: UN0442.2
Class: Basic
Family: Jun-related
Collection: UNVALIDATED
Taxon: Urochordates
Species: Ciona intestinalis
Data Type: SELEX
Validation:
Uniprot ID: Q4H3V9  
Source: 31267468
Comment:

Sequence logo

Frequency matrix

         
A [ 588 10 19 924 9 157 26 150 847 ]
C [ 220 18 37 11 832 12 43 763 35 ]
G [ 170 7 817 34 11 821 13 62 63 ]
T [ 22 965 127 30 149 10 917 25 55 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0442.1 UN0442 1 Atf4-5 Ciona intestinalis
Jun-related Basic
UN0442.2 UN0442 2 Atf4-5 Ciona intestinalis
Jun-related Basic
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: