Detailed information of matrix profile UN0442.1

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Profile summary

Name: Atf4-5
Matrix ID: UN0442.1
Class: Basic
Family: Jun-related
Collection: UNVALIDATED
Taxon: Urochordates
Species: Ciona intestinalis
Data Type: SELEX
Validation:
Uniprot ID: Q4H3V9  
Source: 31267468
Comment:

Sequence logo

Frequency matrix

         
A [ 254 281 302 271 275 225 173 588 10 19 924 9 157 26 150 847 50 219 204 262 245 249 ]
C [ 239 220 203 227 222 143 180 220 18 37 11 832 12 43 763 35 215 437 416 244 257 254 ]
G [ 267 244 239 254 248 419 438 170 7 817 34 11 821 13 62 63 298 171 150 221 226 207 ]
T [ 240 255 255 247 256 213 209 22 965 127 30 149 10 917 25 55 437 173 230 273 273 290 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0442.1 UN0442 1 Atf4-5 Ciona intestinalis
Jun-related Basic
UN0442.2 UN0442 2 Atf4-5 Ciona intestinalis
Jun-related Basic
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: