Detailed information of matrix profile UN0442.1

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Profile summary

Name: Atf4-5
Matrix ID: UN0442.1
Class: Basic
Family: Jun-related
Collection: UNVALIDATED
Taxon: Urochordates
Species: Ciona intestinalis
Data Type: SELEX
Validation:
Uniprot ID: Q4H3V9  
Source: 31267468
Comment:

Sequence logo

Frequency matrix

         
A [ 290 273 273 230 173 437 55 25 917 10 149 30 127 965 22 209 213 256 247 255 255 240 ]
C [ 207 226 221 150 171 298 63 62 13 821 11 34 817 7 170 438 419 248 254 239 244 267 ]
G [ 254 257 244 416 437 215 35 763 43 12 832 11 37 18 220 180 143 222 227 203 220 239 ]
T [ 249 245 262 204 219 50 847 150 26 157 9 924 19 10 588 173 225 275 271 302 281 254 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0442.1 UN0442 1 Atf4-5 Ciona intestinalis
Jun-related Basic
UN0442.2 UN0442 2 Atf4-5 Ciona intestinalis
Jun-related Basic
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: