Detailed information of matrix profile UN0423.1

  1. Home
  2. Matrix > UN0423.1
This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

Community curation

Your email will only be used by our team to contact you.

If your contribution is significant, we will acknowledge it in the manuscript of the JASPAR upcoming release. We do not share your information with any third parties.

Profile summary

Name: LEC1-A
Matrix ID: UN0423.1
Class: Heteromeric
Family: NF-YB
Collection: UNVALIDATED
Taxon: Plants
Species: Glycine max
Data Type: ChIP-seq
Validation:
Uniprot ID: B5KMS8  
Source: 28739919
Comment: TF

Sequence logo

Frequency matrix

         
A [ 1925 3228 0 7037 6966 0 40 4 1334 2166 ]
C [ 1271 1636 7614 2 650 0 108 0 1200 2225 ]
G [ 2338 1564 0 293 1 7617 0 7613 2100 1436 ]
T [ 2083 1189 3 285 0 0 7469 0 2983 1790 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0422.1 UN0422 1 LEC1-A Glycine max
NF-YB Heteromeric
UN0423.1 UN0423 1 LEC1-A Glycine max
NF-YB Heteromeric
UN0424.1 UN0424 1 LEC1-A Glycine max
NF-YB Heteromeric
UN0422.2 UN0422 2 LEC1-A Glycine max
NF-YB Heteromeric
UN0423.2 UN0423 2 LEC1-A Glycine max
NF-YB Heteromeric
UN0424.2 UN0424 2 LEC1-A Glycine max
NF-YB Heteromeric
     

-log(P-value) = 209.359

TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: