Detailed information of matrix profile UN0409.1

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Profile summary

Name: RKD2
Matrix ID: UN0409.1
Class: RWP-RK
Family:
Collection: UNVALIDATED
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation:
Uniprot ID: Q9CA66  
Source: 27203113
Comment: No

Sequence logo

Frequency matrix

         
A [ 247 206 184 610 0 3 129 15 15 22 528 240 181 0 70 19 20 157 227 ]
C [ 210 286 2 135 995 194 264 17 51 763 68 111 687 0 165 952 726 370 358 ]
G [ 351 124 797 65 0 453 201 0 0 148 397 244 31 15 15 9 7 90 155 ]
T [ 193 383 17 191 5 349 405 968 934 66 7 405 102 985 750 20 247 383 261 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0409.1 UN0409 1 RKD2 Arabidopsis thaliana
RWP-RK
UN0409.2 UN0409 2 RKD2 Arabidopsis thaliana
RWP-RK
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: