Detailed information of matrix profile UN0406.1

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Profile summary

Name: NLP4
Matrix ID: UN0406.1
Class: RWP-RK
Family:
Collection: UNVALIDATED
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation:
Uniprot ID: Q9LE38  
Source: 27203113
Comment: No

Sequence logo

Frequency matrix

         
A [ 159 230 205 238 170 115 3 0 0 0 8 129 274 263 255 ]
C [ 241 255 395 252 192 537 11 0 992 14 0 627 132 151 334 ]
G [ 244 356 121 142 436 129 0 1000 0 0 992 112 118 323 153 ]
T [ 356 159 279 367 203 219 986 0 8 986 0 132 477 263 258 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0406.1 UN0406 1 NLP4 Arabidopsis thaliana
RWP-RK
UN0406.2 UN0406 2 NLP4 Arabidopsis thaliana
RWP-RK
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: