Detailed information of matrix profile UN0405.1

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Profile summary

Name: MGH6.1
Matrix ID: UN0405.1
Class: GCM
Family: NAC
Collection: UNVALIDATED
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation:
Uniprot ID: Q9LSI4  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 0 82 0 0 0 0 258 454 423 258 320 237 165 670 0 0 31 ]
C [ 443 0 619 969 0 0 237 103 155 103 124 371 247 330 990 0 206 ]
G [ 0 814 361 0 979 268 351 268 196 278 216 62 361 0 10 1000 443 ]
T [ 557 103 21 31 21 732 155 175 227 361 340 330 227 0 0 0 320 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0405.1 UN0405 1 MGH6.1 Arabidopsis thaliana
NAC GCM
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: