Detailed information of matrix profile UN0398.2

  1. Home
  2. Matrix > UN0398.2
This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

Community curation

Your email will only be used by our team to contact you.

If your contribution is significant, we will acknowledge it in the manuscript of the JASPAR upcoming release. We do not share your information with any third parties.

Profile summary

Name: ENY
Matrix ID: UN0398.2
Class: C2H2
Family: IDD
Collection: UNVALIDATED
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation:
Uniprot ID: Q9LVQ7  
Source: 27203113
Comment: No

Sequence logo

Frequency matrix

         
A [ 114 8 0 0 0 0 0 27 3 145 175 239 ]
C [ 50 34 5 3 0 2 1000 96 40 133 2 92 ]
G [ 50 13 7 0 1000 5 0 627 45 62 3 32 ]
T [ 785 945 988 997 0 993 0 250 911 661 820 637 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0398.1 UN0398 1 ENY Arabidopsis thaliana
IDD C2H2
UN0398.2 UN0398 2 ENY Arabidopsis thaliana
IDD C2H2
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: