Detailed information of matrix profile UN0398.1

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Profile summary

Name: ENY
Matrix ID: UN0398.1
Class: C2H2
Family: IDD
Collection: UNVALIDATED
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation:
Uniprot ID: Q9LVQ7  
Source: 27203113
Comment: No

Sequence logo

Frequency matrix

         
A [ 289 538 264 637 820 661 911 250 0 993 0 997 988 945 785 434 464 ]
C [ 353 129 304 32 3 62 45 627 0 5 1000 0 7 13 50 168 129 ]
G [ 109 239 324 92 2 133 40 96 1000 2 0 3 5 34 50 139 113 ]
T [ 249 94 108 239 175 145 3 27 0 0 0 0 0 8 114 259 294 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0398.1 UN0398 1 ENY Arabidopsis thaliana
IDD C2H2
UN0398.2 UN0398 2 ENY Arabidopsis thaliana
IDD C2H2
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: