Detailed information of matrix profile UN0398.1

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Profile summary

Name: ENY
Matrix ID: UN0398.1
Class: C2H2
Family: IDD
Collection: UNVALIDATED
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation:
Uniprot ID: Q9LVQ7  
Source: 27203113
Comment: No

Sequence logo

Frequency matrix

         
A [ 294 259 114 8 0 0 0 0 0 27 3 145 175 239 108 94 249 ]
C [ 113 139 50 34 5 3 0 2 1000 96 40 133 2 92 324 239 109 ]
G [ 129 168 50 13 7 0 1000 5 0 627 45 62 3 32 304 129 353 ]
T [ 464 434 785 945 988 997 0 993 0 250 911 661 820 637 264 538 289 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0398.1 UN0398 1 ENY Arabidopsis thaliana
IDD C2H2
UN0398.2 UN0398 2 ENY Arabidopsis thaliana
IDD C2H2
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: