Detailed information of matrix profile UN0391.1

  1. Home
  2. Matrix > UN0391.1
This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

Community curation

Your email will only be used by our team to contact you.

If your contribution is significant, we will acknowledge it in the manuscript of the JASPAR upcoming release. We do not share your information with any third parties.

Profile summary

Name: AT3G58630
Matrix ID: UN0391.1
Class: Tryptophan
Family: Trihelix
Collection: UNVALIDATED
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation:
Uniprot ID: Q8GXR6  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 234 187 97 38 139 29 0 0 0 793 241 575 360 272 182 ]
C [ 359 216 150 804 2 950 1000 0 0 101 27 105 178 115 238 ]
G [ 115 364 59 45 859 0 0 1000 1000 29 701 114 74 252 207 ]
T [ 292 232 694 114 0 22 0 0 0 77 31 207 387 360 373 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0391.1 UN0391 1 AT3G58630 Arabidopsis thaliana
Trihelix Tryptophan
UN0391.2 UN0391 2 AT3G58630 Arabidopsis thaliana
Trihelix Tryptophan
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: