Detailed information of matrix profile UN0390.1

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Profile summary

Name: AT2G31460
Matrix ID: UN0390.1
Class: B3
Family: REM
Collection: UNVALIDATED
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation:
Uniprot ID: Q9SIC3  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 335 476 457 18 988 1000 1000 6 0 945 366 390 ]
C [ 104 85 49 18 0 0 0 0 0 37 37 79 ]
G [ 293 159 226 957 12 0 0 0 994 6 30 329 ]
T [ 268 280 268 6 0 0 0 994 6 12 567 201 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0390.1 UN0390 1 AT2G31460 Arabidopsis thaliana
REM B3
UN0390.2 UN0390 2 AT2G31460 Arabidopsis thaliana
REM B3
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: