Detailed information of matrix profile UN0386.1

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Profile summary

Name: AGL95
Matrix ID: UN0386.1
Class: MADS
Family: Type
Collection: UNVALIDATED
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation:
Uniprot ID: Q6DR69  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 603 37 945 911 103 244 141 37 13 50 763 13 913 724 229 ]
C [ 71 12 10 7 195 405 34 5 945 141 39 15 25 47 218 ]
G [ 247 934 25 22 556 215 15 17 18 74 176 955 22 104 393 ]
T [ 79 17 20 61 146 136 810 941 24 734 22 17 40 124 160 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0386.1 UN0386 1 AGL95 Arabidopsis thaliana
Type MADS
UN0386.2 UN0386 2 AGL95 Arabidopsis thaliana
Type MADS
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: