Detailed information of matrix profile UN0354.2

  1. Home
  2. Matrix > UN0354.2
This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

Community curation

Your email will only be used by our team to contact you.

If your contribution is significant, we will acknowledge it in the manuscript of the JASPAR upcoming release. We do not share your information with any third parties.

Profile summary

Name: AT3G42860
Matrix ID: UN0354.2
Class: C3H
Family: GRF
Collection: UNVALIDATED
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation:
Uniprot ID: Q9M1L9  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 804 1072 9 0 10 1277 1279 66 122 ]
C [ 100 26 6 2 1271 5 1 1136 114 ]
G [ 170 166 1268 2 1 2 3 6 871 ]
T [ 213 23 4 1283 5 3 4 79 180 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0354.1 UN0354 1 AT3G42860 Arabidopsis thaliana
GRF C3H
UN0354.2 UN0354 2 AT3G42860 Arabidopsis thaliana
GRF C3H
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: