Detailed information of matrix profile UN0130.1

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Profile summary

Name: IRX3
Matrix ID: UN0130.1
Class: Homeo
Family: TALE-type
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation:
Uniprot ID: P78415  
Source: 28473536
Comment: not

Sequence logo

Frequency matrix

         
A [ 3566 12686 22 12686 4491 2021 5840 5670 5606 5964 5207 2773 306 12686 4 154 34 6765 ]
C [ 15 74 12686 0 6050 1342 2056 845 481 461 882 1858 12686 28 2 1 0 2284 ]
G [ 2303 0 5 2 24 12686 1832 916 427 472 791 2038 1454 6163 0 12686 73 2 ]
T [ 6804 32 145 0 12686 370 2958 5255 6173 5789 5806 6019 2319 4569 12686 18 12686 3636 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0130.1 UN0130 1 IRX3 Homo sapiens
TALE-type Homeo
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: