Detailed information of matrix profile UN0130.1

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Profile summary

Name: IRX3
Matrix ID: UN0130.1
Class: Homeo
Family: TALE-type
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation:
Uniprot ID: P78415  
Source: 28473536
Comment: not

Sequence logo

Frequency matrix

         
A [ 3636 12686 18 12686 4569 2319 6019 5806 5789 6173 5255 2958 370 12686 0 145 32 6804 ]
C [ 2 73 12686 0 6163 1454 2038 791 472 427 916 1832 12686 24 2 5 0 2303 ]
G [ 2284 0 1 2 28 12686 1858 882 461 481 845 2056 1342 6050 0 12686 74 15 ]
T [ 6765 34 154 4 12686 306 2773 5207 5964 5606 5670 5840 2021 4491 12686 22 12686 3566 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0130.1 UN0130 1 IRX3 Homo sapiens
TALE-type Homeo
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: