Detailed information of matrix profile MA2452.1

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Profile summary
Name: SPL8A
Matrix ID: MA2452.1
Class: C3H(C),C2HC
Family: SBP
Collection: CORE
Taxon: Plants
Species: Triticum aestivum
Data Type: DAP-seq
Validation: 16554053
Uniprot ID:  
Source: GSE188699
Comment:

Sequence logo

Frequency matrix

         
A [ 15331 1428 18166 170 89 19423 555 909 5546 ]
C [ 1982 469 260 906 130 85 17764 307 12068 ]
G [ 1759 446 723 18101 84 114 1031 840 600 ]
T [ 671 17400 594 566 19440 121 393 17687 1529 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA2452.1 MA2452 1 SPL8A Triticum aestivum
SBP C3H(C),C2HC
     

-log(P-value) = 0.0

TFFM details

TFFM ID: TFFM1073.1

ChIP-seq Centrality
-log(P-value): 1973.76

TFFM first order summary logos

TFFM details

TFFM ID: TFFM1073.1

ChIP-seq Centrality
-log(P-value): 2192.74

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: