Detailed information of matrix profile MA2437.1

  1. Home
  2. Matrix > MA2437.1

Profile summary
Name: SPL19B
Matrix ID: MA2437.1
Class: C3H(C),C2HC
Family: SBP
Collection: CORE
Taxon: Plants
Species: Triticum aestivum
Data Type: DAP-seq
Validation: 16554053
Uniprot ID:  
Source: GSE188699
Comment:

Sequence logo

Frequency matrix

         
A [ 9037 7006 3207 733 871 64778 303 1537 63129 798 1020 4167 1123 ]
C [ 4640 52557 1501 1083 1212 723 43745 780 569 64378 60980 504 56847 ]
G [ 50959 1424 61329 64661 325 648 22560 685 2364 954 1564 60997 1704 ]
T [ 2337 5986 936 496 64565 824 365 63971 911 843 3409 1305 7299 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA2437.1 MA2437 1 SPL19B Triticum aestivum
SBP C3H(C),C2HC
     

-log(P-value) = 0.0

TFFM details

TFFM ID: TFFM1059.1

ChIP-seq Centrality
-log(P-value): 316.321

TFFM first order summary logos

TFFM details

TFFM ID: TFFM1059.1

ChIP-seq Centrality
-log(P-value): 143.828

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: