Detailed information of matrix profile MA2421.1

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Profile summary
Name: SBP8
Matrix ID: MA2421.1
Class: C3H(C),C2HC
Family: SBP
Collection: CORE
Taxon: Plants
Species: Zea mays
Data Type: DAP-seq
Validation: 16095614
Uniprot ID: A0A060CV13  
Source: GSE120304
Comment:

Sequence logo

Frequency matrix

         
A [ 10113 539 99 121 47404 81 309 9248 ]
C [ 5397 519 79 52 509 48049 17080 6297 ]
G [ 5026 397 47947 67 231 70 226 3935 ]
T [ 27864 46945 275 48160 256 200 30785 28920 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA2421.1 MA2421 1 SBP8 Zea mays
SBP C3H(C),C2HC
     

-log(P-value) = 89949.6

TFFM details

TFFM ID: TFFM1047.1

ChIP-seq Centrality
-log(P-value): 90036.3

TFFM first order summary logos

TFFM details

TFFM ID: TFFM1047.1

ChIP-seq Centrality
-log(P-value): 86926.0

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: