Detailed information of matrix profile MA2421.1

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Profile summary
Name: SBP8
Matrix ID: MA2421.1
Class: C3H(C),C2HC
Family: SBP
Collection: CORE
Taxon: Plants
Species: Zea mays
Data Type: DAP-seq
Validation: 16095614
Uniprot ID: A0A060CV13  
Source: GSE120304
Comment:

Sequence logo

Frequency matrix

         
A [ 28920 30785 200 256 48160 275 46945 27864 ]
C [ 3935 226 70 231 67 47947 397 5026 ]
G [ 6297 17080 48049 509 52 79 519 5397 ]
T [ 9248 309 81 47404 121 99 539 10113 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA2421.1 MA2421 1 SBP8 Zea mays
SBP C3H(C),C2HC
     

-log(P-value) = 89949.6

TFFM details

TFFM ID: TFFM1047.1

ChIP-seq Centrality
-log(P-value): 90036.3

TFFM first order summary logos

TFFM details

TFFM ID: TFFM1047.1

ChIP-seq Centrality
-log(P-value): 86926.0

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: