Detailed information of matrix profile MA2420.1

  1. Home
  2. Matrix > MA2420.1

Profile summary
Name: SBP6
Matrix ID: MA2420.1
Class: C3H(C),C2HC
Family: SBP
Collection: CORE
Taxon: Plants
Species: Zea mays
Data Type: DAP-seq
Validation: 16554053
Uniprot ID: Q9SM14  
Source: GSE120304
Comment:

Sequence logo

Frequency matrix

         
A [ 11102 11189 127 121 12984 132 12012 10537 ]
C [ 376 290 62 55 51 12922 339 891 ]
G [ 1080 1425 12390 479 66 42 330 490 ]
T [ 607 261 586 12510 64 69 484 1247 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA2420.1 MA2420 1 SBP6 Zea mays
SBP C3H(C),C2HC
     

-log(P-value) = 16365.1

TFFM details

TFFM ID: TFFM1046.1

ChIP-seq Centrality
-log(P-value): 22673.5

TFFM first order summary logos

TFFM details

TFFM ID: TFFM1046.1

ChIP-seq Centrality
-log(P-value): 22551.1

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: