Detailed information of matrix profile MA2419.1

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Profile summary
Name: UB3
Matrix ID: MA2419.1
Class: C3H(C),C2HC
Family: SBP
Collection: CORE
Taxon: Plants
Species: Zea mays
Data Type: DAP-seq
Validation: 16095614
Uniprot ID:  
Source: GSE120304
Comment:

Sequence logo

Frequency matrix

         
A [ 1306 1581 1240 186 284 17876 1250 639 1297 1439 ]
C [ 3465 629 1162 693 675 1213 18318 855 1023 11905 ]
G [ 11116 1201 795 18929 196 287 269 527 566 2963 ]
T [ 4243 16719 16933 322 18975 754 293 18109 17244 3823 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA2419.1 MA2419 1 UB3 Zea mays
SBP C3H(C),C2HC
     

-log(P-value) = 34919.1

TFFM details

TFFM ID: TFFM1045.1

ChIP-seq Centrality
-log(P-value): 117320.0

TFFM first order summary logos

TFFM details

TFFM ID: TFFM1045.1

ChIP-seq Centrality
-log(P-value): 114278.0

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: