Detailed information of matrix profile MA2419.1

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Profile summary
Name: UB3
Matrix ID: MA2419.1
Class: C3H(C),C2HC
Family: SBP
Collection: CORE
Taxon: Plants
Species: Zea mays
Data Type: DAP-seq
Validation: 16095614
Uniprot ID:  
Source: GSE120304
Comment:

Sequence logo

Frequency matrix

         
A [ 3823 17244 18109 293 754 18975 322 16933 16719 4243 ]
C [ 2963 566 527 269 287 196 18929 795 1201 11116 ]
G [ 11905 1023 855 18318 1213 675 693 1162 629 3465 ]
T [ 1439 1297 639 1250 17876 284 186 1240 1581 1306 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA2419.1 MA2419 1 UB3 Zea mays
SBP C3H(C),C2HC
     

-log(P-value) = 34919.1

TFFM details

TFFM ID: TFFM1045.1

ChIP-seq Centrality
-log(P-value): 117320.0

TFFM first order summary logos

TFFM details

TFFM ID: TFFM1045.1

ChIP-seq Centrality
-log(P-value): 114278.0

TFFM detailed summary logos

Description:

Alias:

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Consensus:

Included Models:

GC Content: