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Detailed information of matrix profile
MA2400.1
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SPI1
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P17676
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ChIP-seq
,
Homo sapiens
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Profile summary
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Name:
LjTCP20
Matrix ID:
MA2400.1
Class:
TCP
Family:
Collection:
CORE
Taxon:
Plants
Species:
Data Type:
PBM
Validation:
12000681
Uniprot ID:
Source:
25215497
Comment:
Sequence logo
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Frequency matrix
JASPAR
TRANSFAC
MEME
RAW PFM
Reverse comp.
A [
50
0
0
928
0
0
879
59
]
C [
0
0
0
72
999
999
40
587
]
G [
749
999
999
0
0
0
80
59
]
T [
200
0
0
0
0
0
0
294
]
Binding sites information
No Binding sites available for this model.
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Version information
ChIP-seq centrality
First order TFFM
Detailed TFFM
Wordclouds
More details
Matrix ID
Base ID
Version
Name
Species
Family
Class
Sequence logo
MA2400.1
MA2400
1
LjTCP20
TCP
JASPAR
TRANSFAC
MEME
RAW PFM
×
There is no centrality information of the model.
×
TFFM first order profile doesn't exist for this profile.
×
TFFM detailed profile doesn't exist for this profile.
Description:
Alias:
Symbol:
Consensus:
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