Detailed information of matrix profile MA2396.1

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Profile summary
Name: IDD1
Matrix ID: MA2396.1
Class: C2H2
Family: IDD
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 24039602
Uniprot ID: Q9LVQ7  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 114 8 0 0 0 0 0 26 3 144 174 238 ]
C [ 50 33 5 3 0 1 1000 95 40 132 1 92 ]
G [ 50 13 6 0 1000 5 0 626 45 62 3 31 ]
T [ 784 944 988 996 0 993 0 250 910 660 820 636 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA2396.1 MA2396 1 IDD1 Arabidopsis thaliana
IDD C2H2
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

Included Models:

GC Content: