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Detailed information of matrix profile
MA2391.1
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Matrix > MA2391.1
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Examples:
SPI1
,
P17676
,
ChIP-seq
,
Homo sapiens
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Profile summary
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Name:
Lg3
Matrix ID:
MA2391.1
Class:
Homeo
Family:
TALE-type
Collection:
CORE
Taxon:
Plants
Species:
Zea mays
Data Type:
PBM
Validation:
19567707
Uniprot ID:
Q9SYT6
Source:
25215497
Comment:
Sequence logo
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Frequency matrix
JASPAR
TRANSFAC
MEME
RAW PFM
Reverse comp.
A [
0
0
999
0
456
94
58
]
C [
0
94
0
905
0
0
740
]
G [
0
905
0
0
542
456
142
]
T [
999
0
0
94
0
448
58
]
Binding sites information
No Binding sites available for this model.
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Version information
ChIP-seq centrality
First order TFFM
Detailed TFFM
Wordclouds
More details
Matrix ID
Base ID
Version
Name
Species
Family
Class
Sequence logo
MA2391.1
MA2391
1
Lg3
Zea mays
TALE-type
Homeo
JASPAR
TRANSFAC
MEME
RAW PFM
×
There is no centrality information of the model.
×
TFFM first order profile doesn't exist for this profile.
×
TFFM detailed profile doesn't exist for this profile.
Description:
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