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Detailed information of matrix profile
MA2365.1
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P17676
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Profile summary
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Name:
VIT_17s0000g10420
Matrix ID:
MA2365.1
Class:
Tryptophan
Family:
Trihelix
Collection:
CORE
Taxon:
Plants
Species:
Data Type:
PBM
Validation:
10437822
Uniprot ID:
D7SH98
Source:
25215497
Comment:
Sequence logo
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Frequency matrix
JASPAR
TRANSFAC
MEME
RAW PFM
Reverse comp.
A [
2
2
2
995
995
2
2
498
]
C [
2
2
2
2
2
995
664
250
]
G [
995
2
2
2
2
2
2
250
]
T [
2
995
995
2
2
2
333
2
]
Binding sites information
No Binding sites available for this model.
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Version information
ChIP-seq centrality
First order TFFM
Detailed TFFM
Wordclouds
More details
Matrix ID
Base ID
Version
Name
Species
Family
Class
Sequence logo
MA2365.1
MA2365
1
VIT_17s0000g10420
Trihelix
Tryptophan
JASPAR
TRANSFAC
MEME
RAW PFM
×
There is no centrality information of the model.
×
TFFM first order profile doesn't exist for this profile.
×
TFFM detailed profile doesn't exist for this profile.
Description:
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Symbol:
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