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Detailed information of matrix profile
MA2364.1
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Profile summary
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Name:
VIT_15s0048g01150
Matrix ID:
MA2364.1
Class:
TCP
Family:
Collection:
CORE
Taxon:
Plants
Species:
Data Type:
PBM
Validation:
21241251
Uniprot ID:
F6I360
Source:
25215497
Comment:
Sequence logo
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Frequency matrix
JASPAR
TRANSFAC
MEME
RAW PFM
Reverse comp.
A [
6
52
137
66
12
3
891
0
]
C [
3
6
137
819
973
965
17
875
]
G [
951
924
551
29
10
0
74
60
]
T [
39
15
173
83
3
30
16
63
]
Binding sites information
No Binding sites available for this model.
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Version information
ChIP-seq centrality
First order TFFM
Detailed TFFM
Wordclouds
More details
Matrix ID
Base ID
Version
Name
Species
Family
Class
Sequence logo
MA2364.1
MA2364
1
VIT_15s0048g01150
TCP
JASPAR
TRANSFAC
MEME
RAW PFM
×
There is no centrality information of the model.
×
TFFM first order profile doesn't exist for this profile.
×
TFFM detailed profile doesn't exist for this profile.
Description:
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