Detailed information of matrix profile MA2020.1

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Profile summary
Name: HSFB4
Matrix ID: MA2020.1
Class: Heat
Family: HSF
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type:
Validation: 8689565
Uniprot ID: Q9C635  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 44 15 81 86 2 10 2 0 0 1 42 25 ]
C [ 11 4 1 1 3 16 1 0 89 62 6 8 ]
G [ 25 64 4 1 83 4 0 0 0 0 30 40 ]
T [ 9 6 3 1 1 59 86 89 0 26 11 16 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA2020.1 MA2020 1 HSFB4 Arabidopsis thaliana
HSF Heat
MA2020.2 MA2020 2 HSFB4 Arabidopsis thaliana
HSF Heat
     

-log(P-value) = 123.557

TFFM details

TFFM ID: TFFM0979.1

ChIP-seq Centrality
-log(P-value): 196.643

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0979.1

ChIP-seq Centrality
-log(P-value): 211.973

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: