Detailed information of matrix profile MA2005.2

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Profile summary
Name: NAC016
Matrix ID: MA2005.2
Class: GCM
Family: NAC
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 24914054
Uniprot ID: A4FVP6  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 193 298 30 0 0 35 233 109 226 183 186 0 1000 563 2 ]
C [ 2 273 966 0 0 85 201 218 472 256 303 968 0 437 0 ]
G [ 211 337 0 466 0 874 146 271 152 134 312 0 0 0 998 ]
T [ 595 92 3 534 1000 5 420 402 149 427 199 32 0 0 0 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA2005.1 MA2005 1 NAC016 Arabidopsis thaliana
NAC GCM
MA2005.2 MA2005 2 NAC016 Arabidopsis thaliana
NAC GCM
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: