Detailed information of matrix profile MA1994.1

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Profile summary
Name: Nkx2-1
Matrix ID: MA1994.1
Class: Homeo
Family: NK
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type:
Validation: 26556242
Uniprot ID: P50220  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 4731 5210 3059 1215 541 518 15157 15106 316 343 886 2063 3756 ]
C [ 3214 3099 2412 4157 213 14172 315 605 118 146 181 4386 4172 ]
G [ 4206 3539 5568 2595 243 657 518 162 15640 275 14886 5386 3094 ]
T [ 4091 4394 5203 8275 15245 895 252 369 168 15478 289 4407 5220 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1994.1 MA1994 1 Nkx2-1 Mus musculus
NK Homeo
MA1994.2 MA1994 2 Nkx2-1 Mus musculus
NK Homeo
     

-log(P-value) = 390.707

TFFM details

TFFM ID: TFFM0961.1

ChIP-seq Centrality
-log(P-value): 10153.9

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0961.1

ChIP-seq Centrality
-log(P-value): 9150.51

TFFM detailed summary logos

Description:

Alias:

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Consensus:

Included Models:

GC Content: