Detailed information of matrix profile MA1994.1

  1. Home
  2. Matrix > MA1994.1

Profile summary
Name: Nkx2-1
Matrix ID: MA1994.1
Class: Homeo
Family: NK
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type:
Validation: 26556242
Uniprot ID: P50220  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 5220 4407 289 15478 168 369 252 895 15245 8275 5203 4394 4091 ]
C [ 3094 5386 14886 275 15640 162 518 657 243 2595 5568 3539 4206 ]
G [ 4172 4386 181 146 118 605 315 14172 213 4157 2412 3099 3214 ]
T [ 3756 2063 886 343 316 15106 15157 518 541 1215 3059 5210 4731 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1994.1 MA1994 1 Nkx2-1 Mus musculus
NK Homeo
MA1994.2 MA1994 2 Nkx2-1 Mus musculus
NK Homeo
     

-log(P-value) = 390.707

TFFM details

TFFM ID: TFFM0961.1

ChIP-seq Centrality
-log(P-value): 10153.9

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0961.1

ChIP-seq Centrality
-log(P-value): 9150.51

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: