Detailed information of matrix profile MA1963.1

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Profile summary
Name: SATB1
Matrix ID: MA1963.1
Class: Homeo
Family: HD-CUT
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type:
Validation: 18187506
Uniprot ID: Q01826  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 10741 13460 9730 1612 841 33685 1281 169 33500 700 9580 13588 13131 ]
C [ 5595 3786 2582 1071 889 123 120 221 37 140 7922 5143 4675 ]
G [ 4715 4803 13196 881 485 128 115 164 195 33122 5320 4284 4807 ]
T [ 13173 12175 8716 30660 32009 288 32708 33670 492 262 11402 11209 11611 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1963.1 MA1963 1 SATB1 Homo sapiens
HD-CUT Homeo
MA1963.2 MA1963 2 SATB1 Homo sapiens
HD-CUT Homeo
     

-log(P-value) = 18252.7

TFFM details

TFFM ID: TFFM0942.1

ChIP-seq Centrality
-log(P-value): 13190.2

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0942.1

ChIP-seq Centrality
-log(P-value): 12916.1

TFFM detailed summary logos

Description:

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GC Content: