Detailed information of matrix profile MA1958.1

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Profile summary
Name: HOXD12::ELK1
Matrix ID: MA1958.1
Class: Homeo::Tryptophan
Family: HOX::Ets-related
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 24218641
Uniprot ID: P19419   P35452  
Source: 26550823
Comment:

Sequence logo

Frequency matrix

         
A [ 135 230 148 95 3 0 487 487 17 7 52 54 0 487 487 487 190 ]
C [ 78 77 240 487 0 0 1 2 3 0 303 0 0 10 0 59 80 ]
G [ 182 257 247 34 487 487 0 0 487 0 5 487 7 5 5 3 96 ]
T [ 92 61 30 5 0 8 0 29 0 487 127 0 487 75 0 27 121 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1958.1 MA1958 1 HOXD12::ELK1 Homo sapiens
HOX::Ets-related Homeo::Tryptophan
MA1958.2 MA1958 2 HOXD12::ELK1 Homo sapiens
HOX::Ets-related Homeo::Tryptophan
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: