Detailed information of matrix profile MA1933.1

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Profile summary
Name: ELK1::SREBF2
Matrix ID: MA1933.1
Class: Tryptophan::Basic
Family: Ets-related::bHLH-ZIP
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 23050235
Uniprot ID: P19419   Q12772  
Source: 26550823
Comment:

Sequence logo

Frequency matrix

         
A [ 533 175 13 3 0 973 973 122 12 74 436 30 51 88 51 973 ]
C [ 53 779 973 17 12 10 11 2 30 481 10 973 68 127 48 37 ]
G [ 439 193 15 973 973 1 8 848 15 492 537 114 973 31 973 86 ]
T [ 290 50 59 0 34 31 204 0 973 82 10 113 5 973 45 186 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1933.1 MA1933 1 ELK1::SREBF2 Homo sapiens
Ets-related::bHLH-ZIP Tryptophan::Basic
MA1933.2 MA1933 2 ELK1::SREBF2 Homo sapiens
Ets-related::bHLH-ZIP Tryptophan::Basic
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: