Detailed information of matrix profile MA1931.1

  1. Home
  2. Matrix > MA1931.1

Profile summary
Name: ELK1::HOXA1
Matrix ID: MA1931.1
Class: Tryptophan::Homeo
Family: Ets-related::HOX-related
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 24218641
Uniprot ID: P19419   P49639  
Source: 26550823
Comment:

Sequence logo

Frequency matrix

         
A [ 57 0 1 0 0 69 69 0 4 69 69 6 3 69 ]
C [ 6 69 69 0 0 0 0 1 7 16 7 12 9 16 ]
G [ 12 15 0 69 69 0 0 69 6 6 9 15 9 13 ]
T [ 19 9 1 0 0 0 1 0 69 3 7 69 69 25 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1931.1 MA1931 1 ELK1::HOXA1 Homo sapiens
Ets-related::HOX-related Tryptophan::Homeo
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: