| Name: | SoxF |
| Matrix ID: | MA1918.1 |
| Class: | High-mobility |
| Family: | SOX-related |
| Collection: | CORE |
| Taxon: | Urochordates |
| Species: | Ciona intestinalis |
| Data Type: | SELEX |
| Validation: | 24680932 |
| Uniprot ID: | Q4H2R8 |
| Source: | 31267468 |
| Comment: |
| A [ | 418 | 472 | 374 | 262 | 293 | 188 | 285 | 958 | 35 | 15 | 64 | 43 | 116 | 254 | 235 | 243 | 242 | 277 | 290 | 303 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 238 | 103 | 130 | 150 | 176 | 350 | 327 | 6 | 10 | 8 | 29 | 22 | 123 | 260 | 208 | 212 | 217 | 188 | 177 | 187 | ] |
| G [ | 133 | 159 | 191 | 220 | 246 | 204 | 94 | 13 | 9 | 15 | 888 | 20 | 99 | 157 | 179 | 195 | 226 | 216 | 203 | 198 | ] |
| T [ | 211 | 266 | 305 | 367 | 284 | 258 | 294 | 23 | 946 | 962 | 20 | 915 | 662 | 329 | 378 | 350 | 315 | 319 | 330 | 312 | ] |
Binding sites information
No Binding sites available for this model.
External links
| Matrix ID | Base ID | Version | Name | Species | Family | Class | Sequence logo |
|---|---|---|---|---|---|---|---|
| MA1918.1 | MA1918 | 1 | SoxF |
Ciona intestinalis
|
SOX-related | High-mobility |  |
| MA1918.2 | MA1918 | 2 | SoxF |
Ciona intestinalis
|
SOX-related | High-mobility |  |
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.
Description:
Alias:
Symbol:
Consensus:
Included Models:
GC Content: