Detailed information of matrix profile MA1902.2

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Profile summary
Name: NFkb
Matrix ID: MA1902.2
Class: Rel
Family: NF-kappaB-related
Collection: CORE
Taxon: Urochordates
Species: Ciona intestinalis
Data Type: SELEX
Validation: 32647255
Uniprot ID: Q4H348  
Source: 31267468
Comment:

Sequence logo

Frequency matrix

         
A [ 123 12 20 155 741 681 147 89 73 90 65 ]
C [ 100 10 8 19 51 56 99 658 877 843 788 ]
G [ 686 964 924 758 137 56 67 49 11 29 71 ]
T [ 90 14 49 68 71 207 687 205 39 38 77 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1902.1 MA1902 1 NFkb Ciona intestinalis
NF-kappaB-related Rel
MA1902.2 MA1902 2 NFkb Ciona intestinalis
NF-kappaB-related Rel
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: