| Name: | Hsf1-2-4 |
| Matrix ID: | MA1887.1 |
| Class: | Heat |
| Family: | HSF |
| Collection: | CORE |
| Taxon: | Urochordates |
| Species: | Ciona intestinalis |
| Data Type: | SELEX |
| Validation: | 25366274 |
| Uniprot ID: | |
| Source: | 31267468 |
| Comment: |
| A [ | 199 | 366 | 106 | 687 | 636 | 224 | 262 | 30 | 17 | 4 | 10 | 695 | 12 | 760 | 723 | 262 | 277 | 179 | 140 | 121 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 216 | 263 | 92 | 96 | 96 | 291 | 185 | 14 | 6 | 987 | 133 | 159 | 19 | 81 | 80 | 275 | 205 | 108 | 96 | 641 | ] |
| G [ | 223 | 227 | 700 | 87 | 97 | 197 | 288 | 17 | 19 | 5 | 140 | 128 | 952 | 58 | 77 | 197 | 264 | 105 | 107 | 107 | ] |
| T [ | 363 | 145 | 102 | 130 | 171 | 288 | 264 | 939 | 958 | 4 | 717 | 18 | 17 | 101 | 120 | 267 | 254 | 608 | 657 | 130 | ] |
Binding sites information
No Binding sites available for this model.
External links
| Matrix ID | Base ID | Version | Name | Species | Family | Class | Sequence logo |
|---|---|---|---|---|---|---|---|
| MA1887.1 | MA1887 | 1 | Hsf1-2-4 |
Ciona intestinalis
|
HSF | Heat |  |
| MA1887.2 | MA1887 | 2 | Hsf1-2-4 |
Ciona intestinalis
|
HSF | Heat |  |
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.
Description:
Alias:
Symbol:
Consensus:
Included Models:
GC Content: