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Detailed information of matrix profile
MA1823.1
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Profile summary
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Name:
Zm00001d027846
Matrix ID:
MA1823.1
Class:
Other
Family:
DOF
Collection:
CORE
Taxon:
Plants
Species:
Zea mays
Data Type:
ChIP-seq
Validation:
10074718
Uniprot ID:
B4FDH4
Source:
33037196
Comment:
Sequence logo
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Frequency matrix
JASPAR
TRANSFAC
MEME
RAW PFM
Reverse comp.
A [
430
399
818
893
929
23
896
915
914
752
429
424
]
C [
159
157
46
17
6
24
29
11
27
53
154
130
]
G [
223
264
86
44
30
866
38
28
33
123
233
261
]
T [
175
167
37
33
22
74
24
33
13
59
171
172
]
Binding sites information
HTML file
FASTA file
BED file
External links
Version information
ChIP-seq centrality
First order TFFM
Detailed TFFM
Wordclouds
More details
Matrix ID
Base ID
Version
Name
Species
Family
Class
Sequence logo
MA1823.1
MA1823
1
Zm00001d027846
Zea mays
DOF
Other
MA1823.2
MA1823
2
Zm00001d027846
Zea mays
DOF
Other
JASPAR
TRANSFAC
MEME
RAW PFM
-log(P-value) = 0.0
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TFFM first order profile doesn't exist for this profile.
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TFFM detailed profile doesn't exist for this profile.
Description:
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