Detailed information of matrix profile MA1810.1

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Profile summary
Name: GLYMA-08G357600
Matrix ID: MA1810.1
Class: B3
Family: LAV
Collection: CORE
Taxon: Plants
Species: Glycine max
Data Type: ChIP-seq
Validation: 29660015
Uniprot ID: I1KZD3  
Source: GSE101649
Comment:

Sequence logo

Frequency matrix

         
A [ 58 42 64 14 10 4 178 2 6 3 159 34 46 55 ]
C [ 46 60 54 9 8 179 1 2 1 172 10 24 33 47 ]
G [ 37 41 29 8 163 4 3 2 177 10 7 11 66 38 ]
T [ 48 46 42 158 8 2 7 183 5 4 13 120 44 49 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1810.1 MA1810 1 GLYMA-08G357600 Glycine max
LAV B3
MA1810.2 MA1810 2 GLYMA-08G357600 Glycine max
LAV B3
     

-log(P-value) = 0.0

TFFM details

TFFM ID: TFFM0932.1

ChIP-seq Centrality
-log(P-value): 6327.77

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0932.1

ChIP-seq Centrality
-log(P-value): 6315.1

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: