Detailed information of matrix profile MA1808.1

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Profile summary
Name: GLYMA-06G314400
Matrix ID: MA1808.1
Class: Basic
Family: Group
Collection: CORE
Taxon: Plants
Species: Glycine max
Data Type: ChIP-seq
Validation: 18365246
Uniprot ID: I1KFN0  
Source: 31892538
Comment:

Sequence logo

Frequency matrix

         
A [ 4908 18522 1272 745 433 595 1246 1863 22437 7096 7296 ]
C [ 11920 2293 24345 411 530 357 1261 24505 1356 6788 6274 ]
G [ 5299 3696 1277 25777 207 26215 21101 862 2120 6336 6535 ]
T [ 5706 3322 939 900 26663 666 4225 603 1920 7613 7728 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1808.1 MA1808 1 GLYMA-06G314400 Glycine max
Group Basic
MA1808.2 MA1808 2 GLYMA-06G314400 Glycine max
Group Basic
     

-log(P-value) = 4459.64

TFFM details

TFFM ID: TFFM0930.1

ChIP-seq Centrality
-log(P-value): 28808.4

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0930.1

ChIP-seq Centrality
-log(P-value): 30222.1

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: