Detailed information of matrix profile MA1791.1

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Profile summary
Name: NAC087
Matrix ID: MA1791.1
Class: GCM
Family: NAC
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 24914054
Uniprot ID: Q9FK44  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 35 250 374 3 0 9 130 172 231 240 207 567 0 1000 278 0 77 398 847 ]
C [ 0 16 143 997 0 2 158 136 195 315 308 40 777 0 722 0 283 176 2 ]
G [ 0 127 245 0 330 0 694 38 250 163 165 195 10 0 0 981 103 9 3 ]
T [ 965 607 238 0 670 990 17 654 323 282 320 198 212 0 0 19 537 417 148 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1791.1 MA1791 1 NAC087 Arabidopsis thaliana
NAC GCM
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: