Detailed information of matrix profile MA1788.1

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Profile summary
Name: NAC054
Matrix ID: MA1788.1
Class: GCM
Family: NAC
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 24914054
Uniprot ID: Q9FRV4  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 9 0 0 181 233 229 194 335 656 0 1000 123 0 44 379 885 172 123 194 ]
C [ 991 0 0 176 163 216 313 278 9 815 0 877 0 379 216 9 419 652 93 ]
G [ 0 300 0 621 115 220 189 101 189 0 0 0 996 106 13 9 137 101 123 ]
T [ 0 700 1000 22 489 335 304 286 145 185 0 0 4 471 392 97 273 123 590 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1788.1 MA1788 1 NAC054 Arabidopsis thaliana
NAC GCM
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: