Detailed information of matrix profile MA1778.1

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Profile summary
Name: MYB80
Matrix ID: MA1778.1
Class: Tryptophan
Family: MYB
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 26484765
Uniprot ID: Q9XHV0  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 158 62 101 62 998 229 0 212 1000 627 81 217 294 227 257 ]
C [ 153 242 297 471 0 771 1000 8 0 371 392 69 195 155 197 ]
G [ 318 136 64 66 0 0 0 5 0 0 8 7 29 168 139 ]
T [ 371 560 538 402 2 0 0 775 0 2 519 708 482 450 407 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1778.1 MA1778 1 MYB80 Arabidopsis thaliana
MYB Tryptophan
MA1778.2 MA1778 2 MYB80 Arabidopsis thaliana
MYB Tryptophan
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: