Detailed information of matrix profile MA1760.1

  1. Home
  2. Matrix > MA1760.1

Profile summary
Name: HSFA6A
Matrix ID: MA1760.1
Class: Heat
Family: HSF
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type:
Validation: 8689565
Uniprot ID: Q1PDN3  
Source: ReMap
Comment: No

Sequence logo

Frequency matrix

         
A [ 3 983 951 80 297 117 6 0 0 917 0 1000 834 ]
C [ 0 0 3 234 323 34 0 1000 51 6 0 0 31 ]
G [ 997 0 0 574 197 0 0 0 17 77 997 0 54 ]
T [ 0 17 46 111 183 849 994 0 931 0 3 0 80 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1760.1 MA1760 1 HSFA6A Arabidopsis thaliana
HSF Heat
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0929.1

ChIP-seq Centrality
-log(P-value): 555.912

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0929.1

ChIP-seq Centrality
-log(P-value): 560.014

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: