Detailed information of matrix profile MA1741.1

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Profile summary
Name: BRN2
Matrix ID: MA1741.1
Class: GCM
Family: NAC
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 20935069
Uniprot ID: Q9SV87  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 37 0 0 199 390 457 321 169 331 7 998 301 2 50 441 793 ]
C [ 960 0 0 209 194 72 176 261 154 532 2 699 0 465 135 8 ]
G [ 0 269 5 537 107 212 166 140 182 48 0 0 925 32 7 0 ]
T [ 3 731 995 55 309 259 338 430 333 413 0 0 74 453 416 199 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1741.1 MA1741 1 BRN2 Arabidopsis thaliana
NAC GCM
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

Included Models:

GC Content: