Detailed information of matrix profile MA1733.1

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Profile summary
Name: ASR3
Matrix ID: MA1733.1
Class: Tryptophan
Family: Trihelix
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 22236699
Uniprot ID: Q8VZ20  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 394 466 563 472 344 184 421 60 0 0 15 474 649 624 ]
C [ 189 182 130 83 120 0 0 810 1000 895 104 28 165 78 ]
G [ 240 124 88 159 285 102 579 0 0 0 10 0 32 78 ]
T [ 177 229 219 285 250 715 0 130 0 105 871 497 154 219 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1733.1 MA1733 1 ASR3 Arabidopsis thaliana
Trihelix Tryptophan
MA1733.2 MA1733 2 ASR3 Arabidopsis thaliana
Trihelix Tryptophan
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: