Detailed information of matrix profile MA1724.1

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Profile summary
Name: Rfx6
Matrix ID: MA1724.1
Class: Fork
Family: RFX-related
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type: ChIP-seq
Validation: 33033118
Uniprot ID: Q8C7R7  
Source: 30462313
Comment:

Sequence logo

Frequency matrix

         
A [ 1432 1506 635 213 216 339 54 66 6994 810 272 2505 3243 ]
C [ 2945 1397 552 339 132 359 8215 1205 146 242 232 2015 1249 ]
G [ 1905 2902 6811 258 117 7474 102 64 1066 6405 7859 2070 2043 ]
T [ 2268 2745 552 7740 8085 378 179 7215 344 1093 187 1960 2015 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1724.1 MA1724 1 Rfx6 Mus musculus
RFX-related Fork
MA1724.2 MA1724 2 Rfx6 Mus musculus
RFX-related Fork
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0917.1

ChIP-seq Centrality
-log(P-value): 964.432

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0917.1

ChIP-seq Centrality
-log(P-value): 965.821

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: